Fol. Biol. 2018, 64, 41-45

https://doi.org/10.14712/fb2018064020041

HPV Status and Mutation Analysis Using Multiparallel Sequencing in Distal Oesophageal and Gastro-oesophageal Junction Adenocarcinomas

M. Vošmik1, H. Vošmiková2, K. Sieglová2, Igor Sirák1, J. Laco2, A. Ryška2, J. Petera1, B. Melichar3, R. Soumarová4

1Department of Oncology and Radiotherapy, Charles University, Faculty of Medicine in Hradec Králové and University Hospital Hradec Králove, Hradec Králové, Czech Republic
2The Fingerland Department of Pathology, Charles University, Faculty of Medicine in Hradec Králové and University Hospital Hradec Králove, Hradec Králové, Czech Republic
3Department of Oncology, Palacký University, Faculty of Medicine and Dentistry and University Hospital Olomouc, Olomouc, Czech Republic
4Department of Radiotherapy and Oncology, Charles University, Third Faculty of Medicine and University Hospital Královské Vinohrady, Prague, Czech Republic

Received May 2018
Accepted May 2018

References

1. Antonsson, A., Knight, L., Whiteman, D. C.; Australian Cancer Study (2016) Human papillomavirus not detected in esophageal adenocarcinoma tumor specimens. Cancer Epidemiol. 41, 96-98.
2. Arnold, M., Karim-Kos, H. E., Coebergh, J. W., Byrnes, G., Antilla, A., Ferlay, J., Renehan, A. G., Forman, D., Soerjomataram, I. (2015) Recent trends in incidence of five common cancers in 26 European countries since 1988: Analysis of the European Cancer Observatory. Eur. J. Cancer 51, 1164-1187.
3. Cancer Genome A tlas Research Network (2017) Integrated genomic characterization of oesophageal carcinoma. Nature 541, 169-175.
4. Chung, S. M., Kao, J., Hyjek, E., Chen, Y. T. (2007) p53 in esophageal adenocarcinoma: a critical reassessment of mutation frequency and identification of 72Arg as the dominant allele. Int. J. Oncol. 31, 1351-1355.
5. Coleman, H. G., Xie, S. H., Lagergren, J. (2018) The epidemiology of esophageal adenocarcinoma. Gastroenterology 154, 390-405.
6. Dulak, A. M., Stojanov, P., Peng, S., Lawrence, M. S., Fox, C., Stewart, C., Bandla, S., Imamura, Y., Schumacher, S. E., Shefler, E., McKenna, A., Carter, S. L., Cibulskis, K., Sivachenko, A., Saksena, G., Voet, D., Ramos, A. H., Auclair, D., Thompson, K., Sougnez, C., Onofrio, R. C., Guiducci, C., Beroukhim, R., Zhou, Z., Lin, L., Lin, J., Reddy, R., Chang, A., Landrenau, R., Pennathur, A., Ogino, S., Luketich, J. D., Golub, T. R., Gabriel, S. B., Lander, E. S., Beer, D. G., Godfrey, T. E., Getz, G., Bass, A. J. (2013) Exome and whole-genome sequencing of esophageal adenocarcinoma identifies recurrent driver events and mutational complexity. Nat. Genet. 45, 478-486.
7. Li, X., Gao, C., Y ang, Y., Zhou, F., L i, M., Jin, Q., Gao, L. (2014) Systematic review with meta-analysis: the association between human papillomavirus infection and oesophageal cancer. Aliment. Pharmacol. Ther. 39, 270-281.
8. Li-Chang, H. H., Kasaian, K., Ng, Y., Lum, A., Kong, E., Lim, H., Jones, S. J., Huntsman, D. G., Schaeffer, D. F., Yip, S. (2015) Retrospective review using targeted deep sequencing reveals mutational differences between gastroesophageal junction and gastric carcinomas. BMC Cancer 15, 32.
9. Noorani, A., Bornschein, J., Lynch, A. G., Secrier, M., A chilleos, A ., Eldridge, M., Bower, L., Weaver, J. M. J., Crawte, J., Ong, C. A., Shannon, N., MacRae, S., Grehan, N., Nutzinger, B., O’Donovan, M., Hardwick, R., Tavaré, S., Fitzgerald, R. C.; Oesophageal Cancer Clinical and Molecular Stratification (OCCAMS) Consortium (2017) A comparative analysis of whole genome sequencing of esophageal adenocarcinoma pre- and post-chemotherapy. Genome Res. 27, 902-912.
10. Pennathur, A., Gibson, M. K., Jobe, B. A., Luketich, J. D. (2013) Oesophageal carcinoma. Lancet 381, 400-412.
11. Rajendra, S., Wang, B., Merrett, N., Sharma, P., Humphris, J., Lee, H. C., Wu, J. (2016) Genomic analysis of HPV-positive versus HPV-negative oesophageal adenocarcinoma identifies a differential mutational landscape. J. Med. Genet. 53, 227-231.
12. Rantanen, T., Oksala, N., Sand, J. (2016) Adenocarcinoma of the oesophagus and oesophagogastric junction: analysis of incidence and risk factors. Anticancer Res. 36, 2323-2329.
13. Strom, S. P. (2016) Current practices and guidelines for clinical next-generation sequencing oncology testing. Cancer Biol. Med. 13, 3-11.
14. Wang, K., Johnson, A., A li, S. M., Klempner, S. J., Bekaii-Saab, T ., Vacirca, J. L., Khaira, D., Yelensky, R., Chmielecki, J., Elvin, J. A., Lipson, D., Miller, V. A., Stephens, P. J., Ross, J. S. (2015) Comprehensive genomic profiling of advanced esophageal squamous cell carcinomas and esophageal adenocarcinomas reveals similarities and differences. Oncologist 20, 1132-1139.
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